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NeEstimator V2.1 estimates contemporary effective population size (Ne) using multi-locus diploid genotypes from population samples.
Version 2.1 (32-bit) for Mac, Linux and PC.
Download “NeEstimator V2.1 (32-bit for Mac, Linux and PC)”Zip+Folder_32_bit_191125.zip – Downloaded 6411 times – 2.76 MB
Version 2.1 (64-bit) for Mac, Linux and PC.
Download “NeEstimator V2.1 (64-bit for Mac, Linux and PC)”Zip+Folder_64_bit_191125.zip – Downloaded 11065 times – 2.77 MB
The SHAZA software assists in matching pairs of microsatellite genotypes in mark recapture studies. It distinguishes rare matches from those that occur by chance and was specifically designed for studies involving many many thousands of genotyped individuals.
You can download a zip file most suitable for your computer platform:
Download “SHAZA for Windows”
Download “SHAZA for Mac OS”
Download “SHAZA for Linux”
Download “SHAZA for Windows”shaza_win_201(1).zip – Downloaded 3833 times – 324.63 KB
Download “SHAZA for Mac OS”shaza_mac_202.zip – Downloaded 3018 times – 153.55 KB
Download “SHAZA for Linux”shaza_linux_201.zip – Downloaded 2772 times – 315.58 KB
These installation zips include the following files:
|fish_example.dat||Example file – Base pair|
|frequency_one.dat||Example file – Allele frequency one|
|frequency_two.dat||Example file -Allele frequecy two|
|shaza *||Intel executable file|
* Windows XP has .exe extension
The sourcecode is also available for download:
SHAZA source 2.6 (ZIP, 157 kB)
The sourcecode includes the following files:
|README||Compile information for source code|
|Makefile||Makefile for compilation|
|C Source_code||Source code|
If you have difficulty accessing files from this website please Contact Us.
LocusEater is a set of programs (ie includes Shadowboxer) to optimise experimental design and microsatellite multiplexing strategies for genetic mark-recapture programs.
The following file includes the LocusEater program (version 1.4) and the online help files.
Download “LocusEater”LocusEaterSetup(1).exe – Downloaded 1915 times – 605.82 KB
NeOGen provides a population-simulation and genetic power analysis framework. It simulates the demographics, genetic composition, and genetic effective population size from species‐specific life history, mortality, population size, and genetic priors
Download “Setup-NeoGen-Power_v1_3_0_6_a1.exe”Setup-NeoGen-Power_v1_3_0_6_a1.exe – Downloaded 2324 times – 200.30 MB